nichetools

{nichetools} is a complementary package to {nicheROVER} that allows the user to extract Bayesian estimates from data objects created by {nicheROVER} (e.g., niche size and similarities).

Installation

You can install the development version of {nichetools} using the following:

install.packages("devtools")
devtools::install_github("benjaminhlina/nichetools")

You can install the r-universe version of {nichetools} using the following:

install.packages("nichetools", 
repos = c("https://benjaminhlina.r-universe.dev", 
"https://cran.r-project.org"))

Progress

• create extract_mu()
  • build tests for extract_mu()
• create extract_sigma()
  • build tests for extract_sigma()
• create niche_ellipse()
  • build tests for niche_ellipse()
• create extract_overlap()
  • build tests for extract_overlap()
• create extract_niche_size()
  • build tests for extract_niche_size()
• Create vignette/modify blog post vignette

Citation

To cite this package please cite the following publications

• Swanson, H.K., Lysy, M., Power, M., Stasko, A.D., Johnson, J.D., and Reist, J.D. 2015. A new probabilistic method for quantifying n-dimensional ecological niches and niche overlap. Ecology 96(2): 318–324. doi:10.1890/14-0235.1

• Hlina BL (2024). nichetools: Complementary package to nicheROVER. R package version 0.1.0. https://benjaminhlina.github.io/nichetools/

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